Cluster: Rep_1004_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_15 | Rep_1004_c_15_85 | 90275 | 91678 | - | 2.A.3.1.15 |
| CAZyme | Rep_1004_c_15 | Rep_1004_c_15_86 | 92044 | 92784 | - | GT26 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_87 | 92799 | 94166 | - | 9.B.128.1.1 |
| CAZyme | Rep_1004_c_15 | Rep_1004_c_15_88 | 94163 | 95248 | - | GT56 |
| TC | Rep_1004_c_15 | Rep_1004_c_15_89 | 95245 | 96495 | - | 2.A.66.2.3 |
Gene ID: Rep_1004_c_15_85
Type: TC
Location: 90275 - 91678 (-)
Type: TC
Location: 90275 - 91678 (-)
Gene ID: Rep_1004_c_15_86
Type: CAZyme
Location: 92044 - 92784 (-)
Type: CAZyme
Location: 92044 - 92784 (-)
Gene ID: Rep_1004_c_15_87
Type: TC
Location: 92799 - 94166 (-)
Type: TC
Location: 92799 - 94166 (-)
Gene ID: Rep_1004_c_15_88
Type: CAZyme
Location: 94163 - 95248 (-)
Type: CAZyme
Location: 94163 - 95248 (-)
Gene ID: Rep_1004_c_15_89
Type: TC
Location: 95245 - 96495 (-)
Type: TC
Location: 95245 - 96495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.