Cluster: Rep_1004_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1004_c_14 | Rep_1004_c_14_531 | 574517 | 575194 | + | 1.B.48.1.5 |
| pfam | Rep_1004_c_14 | Rep_1004_c_14_532 | 575213 | 575569 | + | DUF4810 |
| pfam | Rep_1004_c_14 | Rep_1004_c_14_533 | 575566 | 576222 | + | GNA1162-like |
| CAZyme | Rep_1004_c_14 | Rep_1004_c_14_534 | 576341 | 577831 | + | GH13_5 |
Gene ID: Rep_1004_c_14_531
Type: TC
Location: 574517 - 575194 (+)
Type: TC
Location: 574517 - 575194 (+)
Gene ID: Rep_1004_c_14_532
Type: pfam
Location: 575213 - 575569 (+)
Type: pfam
Location: 575213 - 575569 (+)
Gene ID: Rep_1004_c_14_533
Type: pfam
Location: 575566 - 576222 (+)
Type: pfam
Location: 575566 - 576222 (+)
Gene ID: Rep_1004_c_14_534
Type: CAZyme
Location: 576341 - 577831 (+)
Type: CAZyme
Location: 576341 - 577831 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.