Cluster: Rep_1004_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1004
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1004_c_14 | Rep_1004_c_14_400 | 441746 | 443413 | - | AA3_2 |
| sulfatase | Rep_1004_c_14 | Rep_1004_c_14_401 | 443551 | 445023 | - | S1_6 |
| STP | Rep_1004_c_14 | Rep_1004_c_14_402 | 445038 | 445625 | - | TetR_N |
| TC | Rep_1004_c_14 | Rep_1004_c_14_403 | 446040 | 448079 | + | 2.A.15.1.4 |
Gene ID: Rep_1004_c_14_400
Type: CAZyme
Location: 441746 - 443413 (-)
Type: CAZyme
Location: 441746 - 443413 (-)
Gene ID: Rep_1004_c_14_401
Type: sulfatase
Location: 443551 - 445023 (-)
Type: sulfatase
Location: 443551 - 445023 (-)
Gene ID: Rep_1004_c_14_402
Type: STP
Location: 445038 - 445625 (-)
Type: STP
Location: 445038 - 445625 (-)
Gene ID: Rep_1004_c_14_403
Type: TC
Location: 446040 - 448079 (+)
Type: TC
Location: 446040 - 448079 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia
Species
Serratia marcescens_K
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.