dbCAN Logo

Cluster: Rep_1004_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1004_c_14 Rep_1004_c_14_118 116766 118079 + 2.A.1.14.35
pfam Rep_1004_c_14 Rep_1004_c_14_119 118154 118657 + VTT_dom
TC Rep_1004_c_14 Rep_1004_c_14_120 119303 120703 + 2.A.3.1.7
TC Rep_1004_c_14 Rep_1004_c_14_121 120754 121677 - 2.A.7.3.47
TF Rep_1004_c_14 Rep_1004_c_14_122 121745 122320 + HTH_3
CAZyme Rep_1004_c_14 Rep_1004_c_14_123 122478 123077 + AA6
NULL(UNKNOWN) Rep_1004_c_14 Rep_1004_c_14_124 123314 123628 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1004_c_14 Rep_1004_c_14_125 123746 125206 + 2.A.38.1.6
pfam Rep_1004_c_14 Rep_1004_c_14_126 125359 126159 + Endonuclease_NS
TC Rep_1004_c_14 Rep_1004_c_14_127 126209 129289 - 2.A.6.2.32
TC Rep_1004_c_14 Rep_1004_c_14_128 129300 130382 - 2.A.6.2.32
TC Rep_1004_c_14 Rep_1004_c_14_129 130382 130810 - 2.A.6.2.32
Gene ID: Rep_1004_c_14_118
Type: TC
Location: 116766 - 118079 (+)
Gene ID: Rep_1004_c_14_119
Type: pfam
Location: 118154 - 118657 (+)
Gene ID: Rep_1004_c_14_120
Type: TC
Location: 119303 - 120703 (+)
Gene ID: Rep_1004_c_14_121
Type: TC
Location: 120754 - 121677 (-)
Gene ID: Rep_1004_c_14_122
Type: TF
Location: 121745 - 122320 (+)
Gene ID: Rep_1004_c_14_123
Type: CAZyme
Location: 122478 - 123077 (+)
Gene ID: Rep_1004_c_14_124
Type:
Location: 123314 - 123628 (+)
Gene ID: Rep_1004_c_14_125
Type: TC
Location: 123746 - 125206 (+)
Gene ID: Rep_1004_c_14_126
Type: pfam
Location: 125359 - 126159 (+)
Gene ID: Rep_1004_c_14_127
Type: TC
Location: 126209 - 129289 (-)
Gene ID: Rep_1004_c_14_128
Type: TC
Location: 129300 - 130382 (-)
Gene ID: Rep_1004_c_14_129
Type: TC
Location: 130382 - 130810 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List