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Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RavehSadkaT_2016_SRR6257474_bin.5_k119_960 RavehSadkaT_2016_SRR6257474_bin.5_k119_960_176 206138 208939 + 1.A.13.3.1
pfam RavehSadkaT_2016_SRR6257474_bin.5_k119_960 RavehSadkaT_2016_SRR6257474_bin.5_k119_960_177 209090 209632 + RibD_C
CAZyme RavehSadkaT_2016_SRR6257474_bin.5_k119_960 RavehSadkaT_2016_SRR6257474_bin.5_k119_960_178 209888 216310 + CBM32 | CBM32 | GH84 | GH84
TF RavehSadkaT_2016_SRR6257474_bin.5_k119_960 RavehSadkaT_2016_SRR6257474_bin.5_k119_960_179 216377 217132 - HTH_DeoR
TC RavehSadkaT_2016_SRR6257474_bin.5_k119_960 RavehSadkaT_2016_SRR6257474_bin.5_k119_960_180 217329 218081 + 3.A.1.11.1
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_176
Type: TC
Location: 206138 - 208939 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_177
Type: pfam
Location: 209090 - 209632 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_178
Type: CAZyme
Location: 209888 - 216310 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_179
Type: TF
Location: 216377 - 217132 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_180
Type: TC
Location: 217329 - 218081 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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