Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_156 | 180257 | 183262 | + | GH2 |
| peptidase | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_157 | 183341 | 184717 | + | M38.UNW |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_158 | 184940 | 185584 | + | 2.A.107.1.2 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_156
Type: CAZyme
Location: 180257 - 183262 (+)
Type: CAZyme
Location: 180257 - 183262 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_157
Type: peptidase
Location: 183341 - 184717 (+)
Type: peptidase
Location: 183341 - 184717 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_158
Type: TC
Location: 184940 - 185584 (+)
Type: TC
Location: 184940 - 185584 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.