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Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RavehSadkaT_2016_SRR6257474_bin.5_k119_6035 RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_8 8431 9393 - 2.A.85.5.1
TF RavehSadkaT_2016_SRR6257474_bin.5_k119_6035 RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_9 9447 9785 - PadR
TC RavehSadkaT_2016_SRR6257474_bin.5_k119_6035 RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_10 10009 11871 - 4.A.1.2.6
pfam RavehSadkaT_2016_SRR6257474_bin.5_k119_6035 RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_11 12022 12852 - PRD | PRD | CAT_RBD
CAZyme RavehSadkaT_2016_SRR6257474_bin.5_k119_6035 RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_12 13175 14608 - GH1
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_8
Type: TC
Location: 8431 - 9393 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_9
Type: TF
Location: 9447 - 9785 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_10
Type: TC
Location: 10009 - 11871 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_11
Type: pfam
Location: 12022 - 12852 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_6035_12
Type: CAZyme
Location: 13175 - 14608 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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