Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_13 | 13291 | 17370 | + | GH84 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_14 | 17948 | 24406 | + | CBM71 | CBM71 | GH2 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_15 | 24690 | 26432 | + | 3.A.3.7.2 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_16 | 26462 | 28522 | + | 3.A.3.7.1 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_17 | 28534 | 29106 | + | 3.A.3.7.2 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_13
Type: CAZyme
Location: 13291 - 17370 (+)
Type: CAZyme
Location: 13291 - 17370 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_14
Type: CAZyme
Location: 17948 - 24406 (+)
Type: CAZyme
Location: 17948 - 24406 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_15
Type: TC
Location: 24690 - 26432 (+)
Type: TC
Location: 24690 - 26432 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_16
Type: TC
Location: 26462 - 28522 (+)
Type: TC
Location: 26462 - 28522 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_5960_17
Type: TC
Location: 28534 - 29106 (+)
Type: TC
Location: 28534 - 29106 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.