Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC48
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_00195
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_2 | 124 | 1152 | - | GT2 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_3 | 1160 | 2353 | - | Wzy_C |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_4 | 2364 | 3386 | - | GT2 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_5 | 3432 | 4679 | - | GT4 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_6 | 4694 | 5818 | - | GT4 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_7 | 6398 | 7048 | - | 9.B.18.1.2 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_8 | 7156 | 7812 | - | 8.A.3.2.1 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_9 | 7824 | 8510 | - | 8.A.3.2.4 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_10 | 8667 | 9368 | - | 8.A.3.2.1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_2
Type: CAZyme
Location: 124 - 1152 (-)
Type: CAZyme
Location: 124 - 1152 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_3
Type: pfam
Location: 1160 - 2353 (-)
Type: pfam
Location: 1160 - 2353 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_4
Type: CAZyme
Location: 2364 - 3386 (-)
Type: CAZyme
Location: 2364 - 3386 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_5
Type: CAZyme
Location: 3432 - 4679 (-)
Type: CAZyme
Location: 3432 - 4679 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_6
Type: CAZyme
Location: 4694 - 5818 (-)
Type: CAZyme
Location: 4694 - 5818 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_7
Type: TC
Location: 6398 - 7048 (-)
Type: TC
Location: 6398 - 7048 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_8
Type: TC
Location: 7156 - 7812 (-)
Type: TC
Location: 7156 - 7812 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_9
Type: TC
Location: 7824 - 8510 (-)
Type: TC
Location: 7824 - 8510 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4438_10
Type: TC
Location: 8667 - 9368 (-)
Type: TC
Location: 8667 - 9368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.