Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_00027
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_16 | 15700 | 17076 | + | 4.A.1.2.11 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_17 | 17274 | 17573 | + | 4.A.1.2.2 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_18 | 17598 | 19019 | + | GH1 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_19 | 19105 | 19920 | - | CBM91 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_16
Type: TC
Location: 15700 - 17076 (+)
Type: TC
Location: 15700 - 17076 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_17
Type: TC
Location: 17274 - 17573 (+)
Type: TC
Location: 17274 - 17573 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_18
Type: CAZyme
Location: 17598 - 19019 (+)
Type: CAZyme
Location: 17598 - 19019 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4350_19
Type: CAZyme
Location: 19105 - 19920 (-)
Type: CAZyme
Location: 19105 - 19920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.