Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC46
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_23 | 30084 | 31220 | - | GT28 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_24 | 31290 | 31817 | - | PAP2 | PAP2_3 |
| NULL(UNKNOWN) | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_25 | 32016 | 32639 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_26 | 32652 | 33626 | - | 9.B.104.1.3 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_23
Type: CAZyme
Location: 30084 - 31220 (-)
Type: CAZyme
Location: 30084 - 31220 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_24
Type: pfam
Location: 31290 - 31817 (-)
Type: pfam
Location: 31290 - 31817 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_25
Type:
Location: 32016 - 32639 (-)
Type:
Location: 32016 - 32639 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4249_26
Type: TC
Location: 32652 - 33626 (-)
Type: TC
Location: 32652 - 33626 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.