Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_00020
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_32 | 28864 | 30225 | + | 2.A.23.1.5 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_33 | 30280 | 31704 | - | GH1 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_34 | 31792 | 33720 | - | 4.A.1.2.6 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_35 | 33848 | 34690 | - | PRD | PRD | CAT_RBD |
| NULL(UNKNOWN) | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_36 | 34968 | 35723 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_37 | 35725 | 36597 | - | 3.A.1.132.1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_32
Type: TC
Location: 28864 - 30225 (+)
Type: TC
Location: 28864 - 30225 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_33
Type: CAZyme
Location: 30280 - 31704 (-)
Type: CAZyme
Location: 30280 - 31704 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_34
Type: TC
Location: 31792 - 33720 (-)
Type: TC
Location: 31792 - 33720 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_35
Type: pfam
Location: 33848 - 34690 (-)
Type: pfam
Location: 33848 - 34690 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_36
Type:
Location: 34968 - 35723 (-)
Type:
Location: 34968 - 35723 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4181_37
Type: TC
Location: 35725 - 36597 (-)
Type: TC
Location: 35725 - 36597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.