Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC44
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_23 | 21461 | 23653 | + | GH20 |
| peptidase | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_24 | 23817 | 24632 | + | S33.UPW |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_25 | 24945 | 25562 | + | zf_Tbcl |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057 | RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_26 | 25839 | 26516 | + | 3.A.1.134.12 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_23
Type: CAZyme
Location: 21461 - 23653 (+)
Type: CAZyme
Location: 21461 - 23653 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_24
Type: peptidase
Location: 23817 - 24632 (+)
Type: peptidase
Location: 23817 - 24632 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_25
Type: pfam
Location: 24945 - 25562 (+)
Type: pfam
Location: 24945 - 25562 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_4057_26
Type: TC
Location: 25839 - 26516 (+)
Type: TC
Location: 25839 - 26516 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.