Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_59 | 70110 | 72521 | - | GH39 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_60 | 72715 | 74160 | - | FAD_binding_2 | DAO | Thi4 | FAD_oxidored | NAD_binding_8 |
| STP | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_61 | 74413 | 75240 | - | CbiA |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_62 | 75564 | 76055 | - | 3.A.1.25.5 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_63 | 76266 | 77780 | + | Metallophos | 5_nucleotid_C |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_64 | 77917 | 80076 | - | 9.B.74.1.1 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_65 | 80086 | 82254 | - | 9.B.74.1.1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_59
Type: CAZyme
Location: 70110 - 72521 (-)
Type: CAZyme
Location: 70110 - 72521 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_60
Type: pfam
Location: 72715 - 74160 (-)
Type: pfam
Location: 72715 - 74160 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_61
Type: STP
Location: 74413 - 75240 (-)
Type: STP
Location: 74413 - 75240 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_62
Type: TC
Location: 75564 - 76055 (-)
Type: TC
Location: 75564 - 76055 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_63
Type: pfam
Location: 76266 - 77780 (+)
Type: pfam
Location: 76266 - 77780 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_64
Type: TC
Location: 77917 - 80076 (-)
Type: TC
Location: 77917 - 80076 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_65
Type: TC
Location: 80086 - 82254 (-)
Type: TC
Location: 80086 - 82254 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.