Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_00142
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_49 | 57824 | 58882 | - | GH179 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_50 | 59080 | 60453 | - | 2.A.2.3.3 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_51 | 60742 | 61656 | - | AP_endonuc_2 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_52 | 61679 | 62788 | - | GH179 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_49
Type: CAZyme
Location: 57824 - 58882 (-)
Type: CAZyme
Location: 57824 - 58882 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_50
Type: TC
Location: 59080 - 60453 (-)
Type: TC
Location: 59080 - 60453 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_51
Type: pfam
Location: 60742 - 61656 (-)
Type: pfam
Location: 60742 - 61656 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1336_52
Type: CAZyme
Location: 61679 - 62788 (-)
Type: CAZyme
Location: 61679 - 62788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.