Cluster: RavehSadkaT_2016_SRR6257433_bin.2_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257433_bin.2
- CGC Family ID: CGCFAM_00029
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427 | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_24 | 26922 | 27884 | - | GT2 |
| pfam | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427 | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_25 | 27868 | 28713 | - | LicD |
| pfam | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427 | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_26 | 28706 | 29923 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| TC | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427 | RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_27 | 30391 | 31071 | - | 9.B.18.1.3 |
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_24
Type: CAZyme
Location: 26922 - 27884 (-)
Type: CAZyme
Location: 26922 - 27884 (-)
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_25
Type: pfam
Location: 27868 - 28713 (-)
Type: pfam
Location: 27868 - 28713 (-)
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_26
Type: pfam
Location: 28706 - 29923 (-)
Type: pfam
Location: 28706 - 29923 (-)
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_2427_27
Type: TC
Location: 30391 - 31071 (-)
Type: TC
Location: 30391 - 31071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella haemolysans_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.