Cluster: RavehSadkaT_2016_SRR6257433_bin.2_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257433_bin.2
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793 | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_4 | 9793 | 11295 | + | 4.A.1.2.8 |
| CAZyme | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793 | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_5 | 11285 | 12595 | + | GH32 |
| STP | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793 | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_6 | 12597 | 13535 | + | PfkB |
| TC | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793 | RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_7 | 13824 | 14618 | + | 1.A.8.9.6 |
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_4
Type: TC
Location: 9793 - 11295 (+)
Type: TC
Location: 9793 - 11295 (+)
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_5
Type: CAZyme
Location: 11285 - 12595 (+)
Type: CAZyme
Location: 11285 - 12595 (+)
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_6
Type: STP
Location: 12597 - 13535 (+)
Type: STP
Location: 12597 - 13535 (+)
Gene ID: RavehSadkaT_2016_SRR6257433_bin.2_k119_1793_7
Type: TC
Location: 13824 - 14618 (+)
Type: TC
Location: 13824 - 14618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella haemolysans_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.