Cluster: RavehSadkaT_2015_SRR1779135_bin.3_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779135_bin.3
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779135_bin.3_k141_8355 | RavehSadkaT_2015_SRR1779135_bin.3_k141_8355_133 | 157463 | 158566 | + | GT9 |
| CAZyme | RavehSadkaT_2015_SRR1779135_bin.3_k141_8355 | RavehSadkaT_2015_SRR1779135_bin.3_k141_8355_134 | 158589 | 159761 | - | GT9 |
| TC | RavehSadkaT_2015_SRR1779135_bin.3_k141_8355 | RavehSadkaT_2015_SRR1779135_bin.3_k141_8355_135 | 159843 | 161138 | - | 3.A.18.1.1 |
Gene ID: RavehSadkaT_2015_SRR1779135_bin.3_k141_8355_133
Type: CAZyme
Location: 157463 - 158566 (+)
Type: CAZyme
Location: 157463 - 158566 (+)
Gene ID: RavehSadkaT_2015_SRR1779135_bin.3_k141_8355_134
Type: CAZyme
Location: 158589 - 159761 (-)
Type: CAZyme
Location: 158589 - 159761 (-)
Gene ID: RavehSadkaT_2015_SRR1779135_bin.3_k141_8355_135
Type: TC
Location: 159843 - 161138 (-)
Type: TC
Location: 159843 - 161138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
Negativicoccus
Species
Negativicoccus sp900556745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.