Cluster: RavehSadkaT_2015_SRR1779135_bin.3_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779135_bin.3
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779135_bin.3_k141_4521 | RavehSadkaT_2015_SRR1779135_bin.3_k141_4521_102 | 93272 | 94411 | + | GT19 |
| TC | RavehSadkaT_2015_SRR1779135_bin.3_k141_4521 | RavehSadkaT_2015_SRR1779135_bin.3_k141_4521_103 | 94404 | 96134 | + | 3.A.1.106.3 |
| CAZyme | RavehSadkaT_2015_SRR1779135_bin.3_k141_4521 | RavehSadkaT_2015_SRR1779135_bin.3_k141_4521_104 | 96136 | 97467 | + | GT30 |
Gene ID: RavehSadkaT_2015_SRR1779135_bin.3_k141_4521_102
Type: CAZyme
Location: 93272 - 94411 (+)
Type: CAZyme
Location: 93272 - 94411 (+)
Gene ID: RavehSadkaT_2015_SRR1779135_bin.3_k141_4521_103
Type: TC
Location: 94404 - 96134 (+)
Type: TC
Location: 94404 - 96134 (+)
Gene ID: RavehSadkaT_2015_SRR1779135_bin.3_k141_4521_104
Type: CAZyme
Location: 96136 - 97467 (+)
Type: CAZyme
Location: 96136 - 97467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Negativicoccaceae
Genus
Negativicoccus
Species
Negativicoccus sp900556745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.