Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_1337 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1337_2 | 918 | 2498 | + | 4.A.1.1.3 |
| NULL(UNKNOWN) | RavehSadkaT_2015_SRR1779126_bin.1_k141_1337 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1337_3 | 2776 | 2967 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_1337 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1337_4 | 3227 | 4558 | + | GH4 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1337_2
Type: TC
Location: 918 - 2498 (+)
Type: TC
Location: 918 - 2498 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1337_3
Type:
Location: 2776 - 2967 (-)
Type:
Location: 2776 - 2967 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1337_4
Type: CAZyme
Location: 3227 - 4558 (+)
Type: CAZyme
Location: 3227 - 4558 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.