Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_2 | 1864 | 3171 | + | 3.A.1.1.4 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_3 | 3245 | 4141 | + | 3.A.1.1.4 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_4 | 4134 | 4979 | + | 3.A.1.1.4 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025 | RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_5 | 5015 | 8047 | + | GH2 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_2
Type: TC
Location: 1864 - 3171 (+)
Type: TC
Location: 1864 - 3171 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_3
Type: TC
Location: 3245 - 4141 (+)
Type: TC
Location: 3245 - 4141 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_4
Type: TC
Location: 4134 - 4979 (+)
Type: TC
Location: 4134 - 4979 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_1025_5
Type: CAZyme
Location: 5015 - 8047 (+)
Type: CAZyme
Location: 5015 - 8047 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.