Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00276
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_712 | RavehSadkaT_2015_SRR1779126_bin.1_k141_712_1 | 3 | 251 | + | 4.A.3.2.2 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_712 | RavehSadkaT_2015_SRR1779126_bin.1_k141_712_2 | 253 | 1344 | + | GH170 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_712 | RavehSadkaT_2015_SRR1779126_bin.1_k141_712_3 | 2000 | 2938 | + | 4.A.3.2.8 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_712_1
Type: TC
Location: 3 - 251 (+)
Type: TC
Location: 3 - 251 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_712_2
Type: CAZyme
Location: 253 - 1344 (+)
Type: CAZyme
Location: 253 - 1344 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_712_3
Type: TC
Location: 2000 - 2938 (+)
Type: TC
Location: 2000 - 2938 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.