Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_7 | 4930 | 6018 | + | 3.A.1.2.10 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_8 | 6245 | 7645 | + | 3.A.6.1.1 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_9 | 7803 | 8906 | - | GT28 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_10 | 9260 | 10081 | - | GT8 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_7
Type: TC
Location: 4930 - 6018 (+)
Type: TC
Location: 4930 - 6018 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_8
Type: TC
Location: 6245 - 7645 (+)
Type: TC
Location: 6245 - 7645 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_9
Type: CAZyme
Location: 7803 - 8906 (-)
Type: CAZyme
Location: 7803 - 8906 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11430_10
Type: CAZyme
Location: 9260 - 10081 (-)
Type: CAZyme
Location: 9260 - 10081 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.