Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_05574
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_7 | 7445 | 8467 | - | GT2 |
| pfam | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_8 | 8716 | 9801 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | Sacchrp_dh_NADP | NAD_binding_3 | GFO_IDH_MocA_C3 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_9 | 9821 | 10426 | - | 9.B.18.1.3 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275 | RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_10 | 10457 | 11413 | - | 9.B.18.2.1 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_7
Type: CAZyme
Location: 7445 - 8467 (-)
Type: CAZyme
Location: 7445 - 8467 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_8
Type: pfam
Location: 8716 - 9801 (-)
Type: pfam
Location: 8716 - 9801 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_9
Type: TC
Location: 9821 - 10426 (-)
Type: TC
Location: 9821 - 10426 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_11275_10
Type: TC
Location: 10457 - 11413 (-)
Type: TC
Location: 10457 - 11413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.