Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC40
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_10895 | RavehSadkaT_2015_SRR1779126_bin.1_k141_10895_3 | 1742 | 3589 | + | 4.A.1.2.6 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_10895 | RavehSadkaT_2015_SRR1779126_bin.1_k141_10895_4 | 3691 | 5103 | + | GH1 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_10895 | RavehSadkaT_2015_SRR1779126_bin.1_k141_10895_5 | 5185 | 6639 | + | GH1 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_10895_3
Type: TC
Location: 1742 - 3589 (+)
Type: TC
Location: 1742 - 3589 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_10895_4
Type: CAZyme
Location: 3691 - 5103 (+)
Type: CAZyme
Location: 3691 - 5103 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_10895_5
Type: CAZyme
Location: 5185 - 6639 (+)
Type: CAZyme
Location: 5185 - 6639 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.