Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00012
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769 | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_8 | 5621 | 7081 | + | GH1 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769 | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_9 | 7078 | 7380 | + | 4.A.3.2.8 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769 | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_10 | 7424 | 8770 | + | 4.A.3.2.7 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769 | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_11 | 8794 | 9108 | + | 4.A.3.2.2 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769 | RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_12 | 9188 | 10597 | + | GH1 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_8
Type: CAZyme
Location: 5621 - 7081 (+)
Type: CAZyme
Location: 5621 - 7081 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_9
Type: TC
Location: 7078 - 7380 (+)
Type: TC
Location: 7078 - 7380 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_10
Type: TC
Location: 7424 - 8770 (+)
Type: TC
Location: 7424 - 8770 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_11
Type: TC
Location: 8794 - 9108 (+)
Type: TC
Location: 8794 - 9108 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_9769_12
Type: CAZyme
Location: 9188 - 10597 (+)
Type: CAZyme
Location: 9188 - 10597 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.