Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00040
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262 | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_5 | 6367 | 7803 | - | 2.A.66.2.16 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262 | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_6 | 8120 | 9166 | - | GT2 |
| NULL(UNKNOWN) | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262 | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_7 | 9156 | 10376 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262 | RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_8 | 10392 | 11552 | - | GT4 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_5
Type: TC
Location: 6367 - 7803 (-)
Type: TC
Location: 6367 - 7803 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_6
Type: CAZyme
Location: 8120 - 9166 (-)
Type: CAZyme
Location: 8120 - 9166 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_7
Type:
Location: 9156 - 10376 (-)
Type:
Location: 9156 - 10376 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_8262_8
Type: CAZyme
Location: 10392 - 11552 (-)
Type: CAZyme
Location: 10392 - 11552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.