Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00205
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_3 | 2513 | 2971 | + | 4.A.2.1.21 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_4 | 2985 | 3290 | + | 4.A.2.1.3 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_5 | 3327 | 4394 | + | 4.A.2.1.10 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_6 | 4486 | 5100 | + | 2.A.115.2.2 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_7 | 5188 | 7788 | + | GH38 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_3
Type: TC
Location: 2513 - 2971 (+)
Type: TC
Location: 2513 - 2971 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_4
Type: TC
Location: 2985 - 3290 (+)
Type: TC
Location: 2985 - 3290 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_5
Type: TC
Location: 3327 - 4394 (+)
Type: TC
Location: 3327 - 4394 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_6
Type: TC
Location: 4486 - 5100 (+)
Type: TC
Location: 4486 - 5100 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7701_7
Type: CAZyme
Location: 5188 - 7788 (+)
Type: CAZyme
Location: 5188 - 7788 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.