Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_1 | 1 | 420 | + | 9.B.104.1.3 |
| NULL(UNKNOWN) | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_2 | 442 | 1062 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_3 | 1282 | 2628 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684 | RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_4 | 2966 | 4357 | + | GT2 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_1
Type: TC
Location: 1 - 420 (+)
Type: TC
Location: 1 - 420 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_2
Type:
Location: 442 - 1062 (+)
Type:
Location: 442 - 1062 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_3
Type: pfam
Location: 1282 - 2628 (+)
Type: pfam
Location: 1282 - 2628 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_7684_4
Type: CAZyme
Location: 2966 - 4357 (+)
Type: CAZyme
Location: 2966 - 4357 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.