Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_486 | RavehSadkaT_2015_SRR1779126_bin.1_k141_486_2 | 470 | 1843 | - | 4.A.7.1.2 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_486 | RavehSadkaT_2015_SRR1779126_bin.1_k141_486_3 | 1881 | 2162 | - | 4.A.7.1.2 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_486 | RavehSadkaT_2015_SRR1779126_bin.1_k141_486_4 | 2178 | 2639 | - | 4.A.7.1.1 |
| pfam | RavehSadkaT_2015_SRR1779126_bin.1_k141_486 | RavehSadkaT_2015_SRR1779126_bin.1_k141_486_5 | 2668 | 3384 | - | TAL_FSA |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_486 | RavehSadkaT_2015_SRR1779126_bin.1_k141_486_6 | 3612 | 4853 | - | CE9 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_486_2
Type: TC
Location: 470 - 1843 (-)
Type: TC
Location: 470 - 1843 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_486_3
Type: TC
Location: 1881 - 2162 (-)
Type: TC
Location: 1881 - 2162 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_486_4
Type: TC
Location: 2178 - 2639 (-)
Type: TC
Location: 2178 - 2639 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_486_5
Type: pfam
Location: 2668 - 3384 (-)
Type: pfam
Location: 2668 - 3384 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_486_6
Type: CAZyme
Location: 3612 - 4853 (-)
Type: CAZyme
Location: 3612 - 4853 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.