Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_2 | 3061 | 3477 | + | 4.A.6.1.7 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_3 | 3498 | 4295 | + | 4.A.6.1.13 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_4 | 4282 | 5085 | + | 4.A.6.1.13 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_5 | 5105 | 5602 | + | 4.A.6.1.18 |
| pfam | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_6 | 5633 | 6346 | + | SIS_2 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_7 | 6368 | 7603 | + | GH29 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_2
Type: TC
Location: 3061 - 3477 (+)
Type: TC
Location: 3061 - 3477 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_3
Type: TC
Location: 3498 - 4295 (+)
Type: TC
Location: 3498 - 4295 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_4
Type: TC
Location: 4282 - 5085 (+)
Type: TC
Location: 4282 - 5085 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_5
Type: TC
Location: 5105 - 5602 (+)
Type: TC
Location: 5105 - 5602 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_6
Type: pfam
Location: 5633 - 6346 (+)
Type: pfam
Location: 5633 - 6346 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6936_7
Type: CAZyme
Location: 6368 - 7603 (+)
Type: CAZyme
Location: 6368 - 7603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.