Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00027
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_1 | 3 | 2498 | - | GH39 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_2 | 2888 | 3814 | - | 2.A.10.1.4 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_3 | 3820 | 5274 | - | GH1 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570 | RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_4 | 5301 | 7154 | - | 4.A.1.2.11 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_1
Type: CAZyme
Location: 3 - 2498 (-)
Type: CAZyme
Location: 3 - 2498 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_2
Type: TC
Location: 2888 - 3814 (-)
Type: TC
Location: 2888 - 3814 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_3
Type: CAZyme
Location: 3820 - 5274 (-)
Type: CAZyme
Location: 3820 - 5274 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_6570_4
Type: TC
Location: 5301 - 7154 (-)
Type: TC
Location: 5301 - 7154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.