Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5791 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5791_27 | 22654 | 23793 | - | CE9 |
| STP | RavehSadkaT_2015_SRR1779126_bin.1_k141_5791 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5791_28 | 23962 | 25140 | + | SIS | SIS |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5791 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5791_29 | 25187 | 25618 | + | 4.A.6.1.14 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5791_27
Type: CAZyme
Location: 22654 - 23793 (-)
Type: CAZyme
Location: 22654 - 23793 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5791_28
Type: STP
Location: 23962 - 25140 (+)
Type: STP
Location: 23962 - 25140 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5791_29
Type: TC
Location: 25187 - 25618 (+)
Type: TC
Location: 25187 - 25618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.