Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_02936
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5292 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5292_3 | 2189 | 3664 | - | GH1 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5292 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5292_4 | 3679 | 5085 | - | GH1 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5292 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5292_5 | 5158 | 6939 | - | 4.A.1.2.5 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5292_3
Type: CAZyme
Location: 2189 - 3664 (-)
Type: CAZyme
Location: 2189 - 3664 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5292_4
Type: CAZyme
Location: 3679 - 5085 (-)
Type: CAZyme
Location: 3679 - 5085 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5292_5
Type: TC
Location: 5158 - 6939 (-)
Type: TC
Location: 5158 - 6939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.