Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00084
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5159 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5159_12 | 11188 | 12324 | + | 2.A.103.1.3 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5159 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5159_13 | 12638 | 14080 | - | GH1 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5159 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5159_14 | 14236 | 14850 | + | 2.A.115.2.13 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5159_12
Type: TC
Location: 11188 - 12324 (+)
Type: TC
Location: 11188 - 12324 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5159_13
Type: CAZyme
Location: 12638 - 14080 (-)
Type: CAZyme
Location: 12638 - 14080 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5159_14
Type: TC
Location: 14236 - 14850 (+)
Type: TC
Location: 14236 - 14850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.