Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: host glycan/beta-glucan
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_00012
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_2 | 1120 | 2292 | + | GH170 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_3 | 2408 | 3889 | - | GH1 |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_4 | 3890 | 5335 | - | GH1 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_5 | 5417 | 6709 | - | 4.A.3.2.3 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_6 | 6744 | 7043 | - | 4.A.3.2.2 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075 | RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_7 | 7065 | 7373 | - | 4.A.3.1.3 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_2
Type: CAZyme
Location: 1120 - 2292 (+)
Type: CAZyme
Location: 1120 - 2292 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_3
Type: CAZyme
Location: 2408 - 3889 (-)
Type: CAZyme
Location: 2408 - 3889 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_4
Type: CAZyme
Location: 3890 - 5335 (-)
Type: CAZyme
Location: 3890 - 5335 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_5
Type: TC
Location: 5417 - 6709 (-)
Type: TC
Location: 5417 - 6709 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_6
Type: TC
Location: 6744 - 7043 (-)
Type: TC
Location: 6744 - 7043 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_5075_7
Type: TC
Location: 7065 - 7373 (-)
Type: TC
Location: 7065 - 7373 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.