Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- CGC Family ID: CGCFAM_02105
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_4416 | RavehSadkaT_2015_SRR1779126_bin.1_k141_4416_16 | 16542 | 17426 | + | GH1 |
| STP | RavehSadkaT_2015_SRR1779126_bin.1_k141_4416 | RavehSadkaT_2015_SRR1779126_bin.1_k141_4416_17 | 17567 | 18148 | - | TetR_N |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_4416 | RavehSadkaT_2015_SRR1779126_bin.1_k141_4416_18 | 18333 | 21005 | + | 9.B.74.1.3 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_4416_16
Type: CAZyme
Location: 16542 - 17426 (+)
Type: CAZyme
Location: 16542 - 17426 (+)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_4416_17
Type: STP
Location: 17567 - 18148 (-)
Type: STP
Location: 17567 - 18148 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_4416_18
Type: TC
Location: 18333 - 21005 (+)
Type: TC
Location: 18333 - 21005 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.