Cluster: RavehSadkaT_2015_SRR1779126_bin.1_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2015_SRR1779126_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_239 | RavehSadkaT_2015_SRR1779126_bin.1_k141_239_2 | 2337 | 2792 | - | 4.A.1.1.9 |
| pfam | RavehSadkaT_2015_SRR1779126_bin.1_k141_239 | RavehSadkaT_2015_SRR1779126_bin.1_k141_239_3 | 2805 | 3737 | - | PMI_typeI_cat | MPI_cupin_dom |
| NULL(UNKNOWN) | RavehSadkaT_2015_SRR1779126_bin.1_k141_239 | RavehSadkaT_2015_SRR1779126_bin.1_k141_239_4 | 3781 | 4419 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | RavehSadkaT_2015_SRR1779126_bin.1_k141_239 | RavehSadkaT_2015_SRR1779126_bin.1_k141_239_5 | 4505 | 7159 | - | GH38 |
| TC | RavehSadkaT_2015_SRR1779126_bin.1_k141_239 | RavehSadkaT_2015_SRR1779126_bin.1_k141_239_6 | 7186 | 8826 | - | 4.A.1.1.3 |
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_239_2
Type: TC
Location: 2337 - 2792 (-)
Type: TC
Location: 2337 - 2792 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_239_3
Type: pfam
Location: 2805 - 3737 (-)
Type: pfam
Location: 2805 - 3737 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_239_4
Type:
Location: 3781 - 4419 (-)
Type:
Location: 3781 - 4419 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_239_5
Type: CAZyme
Location: 4505 - 7159 (-)
Type: CAZyme
Location: 4505 - 7159 (-)
Gene ID: RavehSadkaT_2015_SRR1779126_bin.1_k141_239_6
Type: TC
Location: 7186 - 8826 (-)
Type: TC
Location: 7186 - 8826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.