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Cluster: RahmanSF_2018_SRR5963426_bin.13_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_83 92179 93777 - CE4
pfam RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_84 93780 94490 - Ala_racemase_N
pfam RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_85 94500 97130 - DEAD | Helicase_C | ResIII | DUF3516 | DEXQc_Suv3
TC RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_86 97273 98718 + 2.A.25.1.5
TC RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_87 98736 100214 + 2.A.25.1.5
TC RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_88 100341 101918 + 2.A.25.1.5
TC RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_89 101973 103547 + 2.A.25.1.5
pfam RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_90 103568 104314 + FAA_hydrolase | Rv2993c-like_N
TC RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_91 104400 105878 + 2.A.25.1.5
STP RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_92 105940 107133 - Aminotran_1_2
pfam RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_93 107197 108699 + tRNA-synt_1c | Anticodon_2
CAZyme RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_94 109210 113205 - GH33
CAZyme RahmanSF_2018_SRR5963426_bin.13_k141_11956 RahmanSF_2018_SRR5963426_bin.13_k141_11956_95 113401 114528 + GT4
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_83
Type: CAZyme
Location: 92179 - 93777 (-)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_84
Type: pfam
Location: 93780 - 94490 (-)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_85
Type: pfam
Location: 94500 - 97130 (-)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_86
Type: TC
Location: 97273 - 98718 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_87
Type: TC
Location: 98736 - 100214 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_88
Type: TC
Location: 100341 - 101918 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_89
Type: TC
Location: 101973 - 103547 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_90
Type: pfam
Location: 103568 - 104314 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_91
Type: TC
Location: 104400 - 105878 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_92
Type: STP
Location: 105940 - 107133 (-)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_93
Type: pfam
Location: 107197 - 108699 (+)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_94
Type: CAZyme
Location: 109210 - 113205 (-)
Gene ID: RahmanSF_2018_SRR5963426_bin.13_k141_11956_95
Type: CAZyme
Location: 113401 - 114528 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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