Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_288 | 329374 | 330351 | - | 3.A.1.5.29 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_289 | 330332 | 331354 | - | 3.A.1.5.12 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_290 | 331363 | 332280 | - | 3.A.1.5.20 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_291 | 332292 | 333272 | - | 3.A.1.5.20 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_292 | 333350 | 335080 | - | 3.A.1.5.22 |
| STP | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_293 | 335617 | 337167 | - | NIR_SIR | NIR_SIR_ferr | NIR_SIR_ferr |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_294 | 337268 | 338212 | - | GT2 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_288
Type: TC
Location: 329374 - 330351 (-)
Type: TC
Location: 329374 - 330351 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_289
Type: TC
Location: 330332 - 331354 (-)
Type: TC
Location: 330332 - 331354 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_290
Type: TC
Location: 331363 - 332280 (-)
Type: TC
Location: 331363 - 332280 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_291
Type: TC
Location: 332292 - 333272 (-)
Type: TC
Location: 332292 - 333272 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_292
Type: TC
Location: 333350 - 335080 (-)
Type: TC
Location: 333350 - 335080 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_293
Type: STP
Location: 335617 - 337167 (-)
Type: STP
Location: 335617 - 337167 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_294
Type: CAZyme
Location: 337268 - 338212 (-)
Type: CAZyme
Location: 337268 - 338212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.