Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- CGC Family ID: CGCFAM_00980
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_234 | 264753 | 266144 | + | 2.A.45.3.1 |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_235 | 266220 | 267890 | - | Acetyltransf_1 | Acetyltransf_1 | PNP_UDP_1 | Acetyltransf_3 | Acetyltransf_4 |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_236 | 267904 | 268410 | - | Acetyltransf_1 | FR47 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_7968 | RahmanSF_2018_SRR5963418_bin.7_k141_7968_237 | 268439 | 269635 | - | CE1 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_234
Type: TC
Location: 264753 - 266144 (+)
Type: TC
Location: 264753 - 266144 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_235
Type: pfam
Location: 266220 - 267890 (-)
Type: pfam
Location: 266220 - 267890 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_236
Type: pfam
Location: 267904 - 268410 (-)
Type: pfam
Location: 267904 - 268410 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_7968_237
Type: CAZyme
Location: 268439 - 269635 (-)
Type: CAZyme
Location: 268439 - 269635 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.