Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_3585 | RahmanSF_2018_SRR5963418_bin.7_k141_3585_169 | 177092 | 177850 | + | 2.A.102.3.1 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963418_bin.7_k141_3585 | RahmanSF_2018_SRR5963418_bin.7_k141_3585_170 | 177862 | 178188 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963418_bin.7_k141_3585 | RahmanSF_2018_SRR5963418_bin.7_k141_3585_171 | 178254 | 178550 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_3585 | RahmanSF_2018_SRR5963418_bin.7_k141_3585_172 | 178592 | 180385 | - | GH25 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_3585_169
Type: TC
Location: 177092 - 177850 (+)
Type: TC
Location: 177092 - 177850 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_3585_170
Type:
Location: 177862 - 178188 (+)
Type:
Location: 177862 - 178188 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_3585_171
Type:
Location: 178254 - 178550 (+)
Type:
Location: 178254 - 178550 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_3585_172
Type: CAZyme
Location: 178592 - 180385 (-)
Type: CAZyme
Location: 178592 - 180385 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.