Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_286 | 315392 | 316852 | + | 3.A.1.31.2 |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_287 | 316937 | 319138 | + | AA2 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_288 | 319405 | 321564 | + | 9.B.74.1.1 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_289 | 321575 | 323740 | + | 9.B.74.1.1 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_290 | 323875 | 325818 | + | 3.A.1.122.13 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_291 | 325818 | 327683 | + | 3.A.1.122.13 |
| TF | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_292 | 327769 | 328464 | + | Trans_reg_C |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15958 | RahmanSF_2018_SRR5963418_bin.7_k141_15958_293 | 328451 | 330235 | + | 2.A.21.9.2 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_286
Type: TC
Location: 315392 - 316852 (+)
Type: TC
Location: 315392 - 316852 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_287
Type: CAZyme
Location: 316937 - 319138 (+)
Type: CAZyme
Location: 316937 - 319138 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_288
Type: TC
Location: 319405 - 321564 (+)
Type: TC
Location: 319405 - 321564 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_289
Type: TC
Location: 321575 - 323740 (+)
Type: TC
Location: 321575 - 323740 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_290
Type: TC
Location: 323875 - 325818 (+)
Type: TC
Location: 323875 - 325818 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_291
Type: TC
Location: 325818 - 327683 (+)
Type: TC
Location: 325818 - 327683 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_292
Type: TF
Location: 327769 - 328464 (+)
Type: TF
Location: 327769 - 328464 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15958_293
Type: TC
Location: 328451 - 330235 (+)
Type: TC
Location: 328451 - 330235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.