Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_137 | 150714 | 151487 | - | 3.A.1.128.6 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_138 | 151674 | 152876 | + | 2.A.27.1.1 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_139 | 152933 | 153463 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_140 | 153642 | 154013 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_141 | 154066 | 156666 | - | 3.A.1.122.2 |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_142 | 156758 | 157438 | - | Hydrolase | HAD_2 |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_143 | 157569 | 158594 | + | GH29 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_144 | 158644 | 159414 | - | 3.A.1.132.6 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_145 | 159408 | 160109 | - | 3.A.1.132.6 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_137
Type: TC
Location: 150714 - 151487 (-)
Type: TC
Location: 150714 - 151487 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_138
Type: TC
Location: 151674 - 152876 (+)
Type: TC
Location: 151674 - 152876 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_139
Type:
Location: 152933 - 153463 (+)
Type:
Location: 152933 - 153463 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_140
Type:
Location: 153642 - 154013 (+)
Type:
Location: 153642 - 154013 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_141
Type: TC
Location: 154066 - 156666 (-)
Type: TC
Location: 154066 - 156666 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_142
Type: pfam
Location: 156758 - 157438 (-)
Type: pfam
Location: 156758 - 157438 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_143
Type: CAZyme
Location: 157569 - 158594 (+)
Type: CAZyme
Location: 157569 - 158594 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_144
Type: TC
Location: 158644 - 159414 (-)
Type: TC
Location: 158644 - 159414 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_145
Type: TC
Location: 159408 - 160109 (-)
Type: TC
Location: 159408 - 160109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.