Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC22
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- CGC Family ID: CGCFAM_00550
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_64 | 60030 | 60896 | - | 3.A.1.148.3 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_65 | 60907 | 62889 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_66 | 63001 | 64542 | - | 2.A.35.2.1 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_67 | 64925 | 66001 | - | 4.D.2.1.5 |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_68 | 66078 | 67106 | - | Acyl_transf_3 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_69 | 67087 | 68148 | - | 4.D.2.1.5 |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_70 | 68117 | 68842 | - | CE4 |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_71 | 68833 | 69924 | - | GT28 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15776 | RahmanSF_2018_SRR5963418_bin.7_k141_15776_72 | 70198 | 71775 | - | 2.A.35.2.1 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_64
Type: TC
Location: 60030 - 60896 (-)
Type: TC
Location: 60030 - 60896 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_65
Type:
Location: 60907 - 62889 (-)
Type:
Location: 60907 - 62889 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_66
Type: TC
Location: 63001 - 64542 (-)
Type: TC
Location: 63001 - 64542 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_67
Type: TC
Location: 64925 - 66001 (-)
Type: TC
Location: 64925 - 66001 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_68
Type: pfam
Location: 66078 - 67106 (-)
Type: pfam
Location: 66078 - 67106 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_69
Type: TC
Location: 67087 - 68148 (-)
Type: TC
Location: 67087 - 68148 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_70
Type: CAZyme
Location: 68117 - 68842 (-)
Type: CAZyme
Location: 68117 - 68842 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_71
Type: CAZyme
Location: 68833 - 69924 (-)
Type: CAZyme
Location: 68833 - 69924 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15776_72
Type: TC
Location: 70198 - 71775 (-)
Type: TC
Location: 70198 - 71775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.