Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_66 | 83480 | 84613 | + | 9.B.34.1.1 |
| STP | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_67 | 84719 | 85801 | + | Diacid_rec |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_68 | 86013 | 87443 | + | PK | PK_C |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_69 | 87616 | 88302 | + | GT51 |
| peptidase | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_70 | 88493 | 89890 | + | C82.001 |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_71 | 89953 | 90846 | + | Metallophos |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_15214 | RahmanSF_2018_SRR5963418_bin.7_k141_15214_72 | 91045 | 94224 | + | 2.A.21.9.2 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_66
Type: TC
Location: 83480 - 84613 (+)
Type: TC
Location: 83480 - 84613 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_67
Type: STP
Location: 84719 - 85801 (+)
Type: STP
Location: 84719 - 85801 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_68
Type: pfam
Location: 86013 - 87443 (+)
Type: pfam
Location: 86013 - 87443 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_69
Type: CAZyme
Location: 87616 - 88302 (+)
Type: CAZyme
Location: 87616 - 88302 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_70
Type: peptidase
Location: 88493 - 89890 (+)
Type: peptidase
Location: 88493 - 89890 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_71
Type: pfam
Location: 89953 - 90846 (+)
Type: pfam
Location: 89953 - 90846 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15214_72
Type: TC
Location: 91045 - 94224 (+)
Type: TC
Location: 91045 - 94224 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.