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Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RahmanSF_2018_SRR5963418_bin.7_k141_15006 RahmanSF_2018_SRR5963418_bin.7_k141_15006_2 1339 2019 + 9.B.18.1.3
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_15006 RahmanSF_2018_SRR5963418_bin.7_k141_15006_3 2020 3165 + GT4
pfam RahmanSF_2018_SRR5963418_bin.7_k141_15006 RahmanSF_2018_SRR5963418_bin.7_k141_15006_4 3162 3731 + Hexapep | Hexapep_2
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_15006 RahmanSF_2018_SRR5963418_bin.7_k141_15006_5 3728 4894 + GT4
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_15006 RahmanSF_2018_SRR5963418_bin.7_k141_15006_6 4932 6032 + GT4
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_15006 RahmanSF_2018_SRR5963418_bin.7_k141_15006_7 6053 7132 + GT4
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15006_2
Type: TC
Location: 1339 - 2019 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15006_3
Type: CAZyme
Location: 2020 - 3165 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15006_4
Type: pfam
Location: 3162 - 3731 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15006_5
Type: CAZyme
Location: 3728 - 4894 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15006_6
Type: CAZyme
Location: 4932 - 6032 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_15006_7
Type: CAZyme
Location: 6053 - 7132 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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