Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_14526 | RahmanSF_2018_SRR5963418_bin.7_k141_14526_37 | 35418 | 37475 | - | 1.B.52.2.2 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_14526 | RahmanSF_2018_SRR5963418_bin.7_k141_14526_38 | 37726 | 39375 | + | 2.A.53.3.9 |
| TF | RahmanSF_2018_SRR5963418_bin.7_k141_14526 | RahmanSF_2018_SRR5963418_bin.7_k141_14526_39 | 39430 | 40959 | - | GntR |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_14526 | RahmanSF_2018_SRR5963418_bin.7_k141_14526_40 | 41093 | 41986 | - | CE4 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_14526_37
Type: TC
Location: 35418 - 37475 (-)
Type: TC
Location: 35418 - 37475 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_14526_38
Type: TC
Location: 37726 - 39375 (+)
Type: TC
Location: 37726 - 39375 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_14526_39
Type: TF
Location: 39430 - 40959 (-)
Type: TF
Location: 39430 - 40959 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_14526_40
Type: CAZyme
Location: 41093 - 41986 (-)
Type: CAZyme
Location: 41093 - 41986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.