Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- CGC Family ID: CGCFAM_02055
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_13836 | RahmanSF_2018_SRR5963418_bin.7_k141_13836_2 | 1202 | 3013 | - | 3.A.1.111.2 |
| STP | RahmanSF_2018_SRR5963418_bin.7_k141_13836 | RahmanSF_2018_SRR5963418_bin.7_k141_13836_3 | 3103 | 4278 | - | HATPase_c |
| TF | RahmanSF_2018_SRR5963418_bin.7_k141_13836 | RahmanSF_2018_SRR5963418_bin.7_k141_13836_4 | 4275 | 4985 | - | LytTR |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_13836 | RahmanSF_2018_SRR5963418_bin.7_k141_13836_5 | 5152 | 6363 | + | GT4 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_13836_2
Type: TC
Location: 1202 - 3013 (-)
Type: TC
Location: 1202 - 3013 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_13836_3
Type: STP
Location: 3103 - 4278 (-)
Type: STP
Location: 3103 - 4278 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_13836_4
Type: TF
Location: 4275 - 4985 (-)
Type: TF
Location: 4275 - 4985 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_13836_5
Type: CAZyme
Location: 5152 - 6363 (+)
Type: CAZyme
Location: 5152 - 6363 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.