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Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RahmanSF_2018_SRR5963418_bin.7_k141_11530 RahmanSF_2018_SRR5963418_bin.7_k141_11530_317 325800 326450 - 9.B.18.1.2
STP RahmanSF_2018_SRR5963418_bin.7_k141_11530 RahmanSF_2018_SRR5963418_bin.7_k141_11530_318 326730 327899 - Aminotran_1_2
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_11530 RahmanSF_2018_SRR5963418_bin.7_k141_11530_319 327987 329072 - GT4
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_11530 RahmanSF_2018_SRR5963418_bin.7_k141_11530_320 329152 330258 - GH177
pfam RahmanSF_2018_SRR5963418_bin.7_k141_11530 RahmanSF_2018_SRR5963418_bin.7_k141_11530_321 330370 331686 - UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC RahmanSF_2018_SRR5963418_bin.7_k141_11530 RahmanSF_2018_SRR5963418_bin.7_k141_11530_322 331780 333621 - 9.B.18.2.1
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_317
Type: TC
Location: 325800 - 326450 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_318
Type: STP
Location: 326730 - 327899 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_319
Type: CAZyme
Location: 327987 - 329072 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_320
Type: CAZyme
Location: 329152 - 330258 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_321
Type: pfam
Location: 330370 - 331686 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_322
Type: TC
Location: 331780 - 333621 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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